WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1n.1 Sequence Name  C30H6.1n.1
Length (nt)  1935   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1n C30H6.1n 1935   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1n.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167878   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167894   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167910   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167926   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167942   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon167958   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon167982   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168006   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168022   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168038   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168048   33   IV: 17354408-17354440 Caenorhabditis elegans
Exon168062   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168078   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168094   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168110   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168126   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168142   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168158   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168176   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168192   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168208   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168218   42   IV: 17356906-17356947 Caenorhabditis elegans
Exon168233   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168249   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168265   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168280   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1n.1 17351940 17357895 1

1 Sequence

Length
1935

1 Sequence Ontology Term

Identifier Name Description
transcript