WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1k.1 Sequence Name  C30H6.1k.1
Length (nt)  1890   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1k C30H6.1k 1890   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1k.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167930   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167946   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167962   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167978   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167994   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon168010   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon168024   30   IV: 17353527-17353556 Caenorhabditis elegans
Exon168034   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168058   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168074   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168090   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168114   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168130   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168146   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168162   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168178   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168194   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168210   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168228   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168244   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168260   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168285   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168301   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168317   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168332   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1k.1 17351940 17357895 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript