WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1q.1 Sequence Name  C30H6.1q.1
Length (nt)  1860   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1q.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1q C30H6.1q 1860   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1q.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167881   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167897   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167913   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167929   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167945   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon167961   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon167985   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168009   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168025   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168041   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168065   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168081   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168097   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168113   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168129   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168145   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168161   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168179   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168195   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168211   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168236   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168252   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168268   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168283   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1q.1 17351940 17357895 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
transcript