WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.10.1 Sequence Name  C30H6.10.1
Length (nt)  542   Chromosome Location  IV: 17368592-17370618
Chromosome . Primary Identifier  IV Chromosome Location . Start  17368592
Chromosome Location . End  17370618 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007827 trh-1 C30H6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.10 C30H6.10 291   IV: 17368668-17368701

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.10.1 17368592 17370618 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168324   110   IV: 17368592-17368701 Caenorhabditis elegans
Exon168325   90   IV: 17369342-17369431 Caenorhabditis elegans
Exon168326   78   IV: 17369879-17369956 Caenorhabditis elegans
Exon168327   264   IV: 17370355-17370618 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.10.1 17368592 17370618 1

1 Sequence

Length
542

1 Sequence Ontology Term

Identifier Name Description
transcript