WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.5b.1 Sequence Name  C30H6.5b.1
Length (nt)  1826   Chromosome Location  IV: 17371769-17375640
Chromosome . Primary Identifier  IV Chromosome Location . Start  17371769
Chromosome Location . End  17375640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007823 C30H6.5 C30H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.5b C30H6.5b 1593   IV: 17371769-17371965

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.5b.1 17371769 17375640 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168330   197   IV: 17371769-17371965 Caenorhabditis elegans
Exon168333   240   IV: 17373479-17373718 Caenorhabditis elegans
Exon168335   231   IV: 17373802-17374032 Caenorhabditis elegans
Exon168337   61   IV: 17374119-17374179 Caenorhabditis elegans
Exon168339   66   IV: 17374230-17374295 Caenorhabditis elegans
Exon168341   157   IV: 17374342-17374498 Caenorhabditis elegans
Exon168342   161   IV: 17374576-17374736 Caenorhabditis elegans
Exon168345   115   IV: 17374785-17374899 Caenorhabditis elegans
Exon168347   108   IV: 17374947-17375054 Caenorhabditis elegans
Exon168349   168   IV: 17375100-17375267 Caenorhabditis elegans
Exon168350   322   IV: 17375319-17375640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.5b.1 17371769 17375640 1

1 Sequence

Length
1826

1 Sequence Ontology Term

Identifier Name Description
transcript