WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.12a.1 Sequence Name  C30H6.12a.1
Length (nt)  738   Chromosome Location  IV: 17383346-17386843
Chromosome . Primary Identifier  IV Chromosome Location . Start  17383346
Chromosome Location . End  17386843 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044238 C30H6.12 C30H6.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.12a C30H6.12a 588   IV: 17383436-17383475

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.12a.1 17383346 17386843 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168382   130   IV: 17383346-17383475 Caenorhabditis elegans
Exon168384   48   IV: 17384246-17384293 Caenorhabditis elegans
Exon168386   63   IV: 17385211-17385273 Caenorhabditis elegans
Exon168387   33   IV: 17385466-17385498 Caenorhabditis elegans
Exon168389   233   IV: 17385718-17385950 Caenorhabditis elegans
Exon168392   231   IV: 17386613-17386843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.12a.1 17383346 17386843 1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
transcript