WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02D1.8.1 Sequence Name  T02D1.8.1
Length (nt)  537   Chromosome Location  IV: 17386763-17387492
Chromosome . Primary Identifier  IV Chromosome Location . Start  17386763
Chromosome Location . End  17387492 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02D1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011374 T02D1.8 T02D1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02D1.8 T02D1.8 378   IV: 17386879-17386965

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02D1.8.1 17386763 17387492 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168414   203   IV: 17386763-17386965 Caenorhabditis elegans
Exon168415   75   IV: 17387007-17387081 Caenorhabditis elegans
Exon168416   56   IV: 17387129-17387184 Caenorhabditis elegans
Exon168417   141   IV: 17387240-17387380 Caenorhabditis elegans
Exon168418   62   IV: 17387431-17387492 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02D1.8.1 17386763 17387492 -1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
transcript