WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A12.4b.1 Sequence Name  C06A12.4b.1
Length (nt)  1821   Chromosome Location  IV: 17432977-17436652
Chromosome . Primary Identifier  IV Chromosome Location . Start  17432977
Chromosome Location . End  17436652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001550 gcy-27 C06A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A12.4b C06A12.4b 1800   IV: 17432977-17433068

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A12.4b.1 17432977 17436652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168487   92   IV: 17432977-17433068 Caenorhabditis elegans
Exon168489   226   IV: 17433124-17433349 Caenorhabditis elegans
Exon168491   147   IV: 17433492-17433638 Caenorhabditis elegans
Exon168493   69   IV: 17433682-17433750 Caenorhabditis elegans
Exon168495   124   IV: 17433794-17433917 Caenorhabditis elegans
Exon168497   141   IV: 17434280-17434420 Caenorhabditis elegans
Exon168499   169   IV: 17434480-17434648 Caenorhabditis elegans
Exon168501   192   IV: 17434866-17435057 Caenorhabditis elegans
Exon168503   175   IV: 17435417-17435591 Caenorhabditis elegans
Exon168505   72   IV: 17435687-17435758 Caenorhabditis elegans
Exon168506   168   IV: 17435807-17435974 Caenorhabditis elegans
Exon168508   69   IV: 17436026-17436094 Caenorhabditis elegans
Exon168510   82   IV: 17436138-17436219 Caenorhabditis elegans
Exon168512   95   IV: 17436558-17436652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A12.4b.1 17432977 17436652 -1

1 Sequence

Length
1821

1 Sequence Ontology Term

Identifier Name Description
transcript