WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A12.4a.1 Sequence Name  C06A12.4a.1
Length (nt)  1851   Chromosome Location  IV: 17432977-17436631
Chromosome . Primary Identifier  IV Chromosome Location . Start  17432977
Chromosome Location . End  17436631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001550 gcy-27 C06A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A12.4a C06A12.4a 1851   IV: 17432977-17433068

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A12.4a.1 17432977 17436631 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168486   92   IV: 17432977-17433068 Caenorhabditis elegans
Exon168488   226   IV: 17433124-17433349 Caenorhabditis elegans
Exon168490   147   IV: 17433492-17433638 Caenorhabditis elegans
Exon168492   69   IV: 17433682-17433750 Caenorhabditis elegans
Exon168494   124   IV: 17433794-17433917 Caenorhabditis elegans
Exon168496   141   IV: 17434280-17434420 Caenorhabditis elegans
Exon168498   169   IV: 17434480-17434648 Caenorhabditis elegans
Exon168500   192   IV: 17434866-17435057 Caenorhabditis elegans
Exon168502   175   IV: 17435417-17435591 Caenorhabditis elegans
Exon168504   72   IV: 17435687-17435758 Caenorhabditis elegans
Exon168507   288   IV: 17435807-17436094 Caenorhabditis elegans
Exon168509   82   IV: 17436138-17436219 Caenorhabditis elegans
Exon168511   74   IV: 17436558-17436631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A12.4a.1 17432977 17436631 -1

1 Sequence

Length
1851

1 Sequence Ontology Term

Identifier Name Description
transcript