WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F11E6.1c Sequence Name  F11E6.1c
Length (nt)  1817   Chromosome Location  IV: 17476657-17479372
Chromosome . Primary Identifier  IV Chromosome Location . Start  17476657
Chromosome Location . End  17479372 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11E6.1c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008706 gba-3 F11E6.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11E6.1c 17476657 17479372 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168606   55   IV: 17476657-17476711 Caenorhabditis elegans
Exon168610   210   IV: 17477109-17477318 Caenorhabditis elegans
Exon168614   284   IV: 17477385-17477668 Caenorhabditis elegans
Exon168618   167   IV: 17477718-17477884 Caenorhabditis elegans
Exon168622   376   IV: 17477933-17478308 Caenorhabditis elegans
Exon168624   248   IV: 17478400-17478647 Caenorhabditis elegans
Exon168627   248   IV: 17478855-17479102 Caenorhabditis elegans
Exon168629   229   IV: 17479144-17479372 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11E6.1c 17476657 17479372 1

1 Sequence

Length
1817

1 Sequence Ontology Term

Identifier Name Description
transcript