WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:4R79.1c Sequence Name  4R79.1c
Length (nt)  1039   Chromosome Location  IV: 17486982-17490497
Chromosome . Primary Identifier  IV Chromosome Location . Start  17486982
Chromosome Location . End  17490497 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
4R79.1c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003525 nas-6 4R79.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:4R79.1c 17486982 17490497 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168707   140   IV: 17486982-17487121 Caenorhabditis elegans
Exon168710   121   IV: 17487224-17487344 Caenorhabditis elegans
Exon168713   156   IV: 17487396-17487551 Caenorhabditis elegans
Exon168716   86   IV: 17488079-17488164 Caenorhabditis elegans
Exon168719   131   IV: 17488229-17488359 Caenorhabditis elegans
Exon168721   118   IV: 17488408-17488525 Caenorhabditis elegans
Exon168722   92   IV: 17488979-17489070 Caenorhabditis elegans
Exon168725   53   IV: 17489115-17489167 Caenorhabditis elegans
Exon168727   142   IV: 17490356-17490497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:4R79.1c 17486982 17490497 -1

1 Sequence

Length
1039

1 Sequence Ontology Term

Identifier Name Description
transcript