WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0348.5a Sequence Name  B0348.5a
Length (nt)  1086   Chromosome Location  V: 2851-3019
Chromosome . Primary Identifier  V Chromosome Location . Start  2851
Chromosome Location . End  3019
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50544 IDPP-2, isoform a 38.5 361 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00038960
WBRNAi00009720
WBRNAi00024385
WBRNAi00024386
WBRNAi00036537
WBRNAi00061971
WBRNAi00027143

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0348.5a 2851 3019 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015153 idpp-2 B0348.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0348.5a 2851 3019 1
CDS:B0348.5a 5538 5966 1
CDS:B0348.5a 6024 6511 1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0348.5a.1 B0348.5a.1 1355   V: 1635-6632