WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0348.4h.1 Sequence Name  B0348.4h.1
Length (nt)  4693   Chromosome Location  V: 20818-43696
Chromosome . Primary Identifier  V Chromosome Location . Start  20818
Chromosome Location . End  43696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4h B0348.4h 3978   V: 21007-21090

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4h.1 20818 43696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168735   273   V: 20818-21090 Caenorhabditis elegans
Exon168767   362   V: 22495-22856 Caenorhabditis elegans
Exon168792   136   V: 23159-23294 Caenorhabditis elegans
Exon168817   84   V: 23562-23645 Caenorhabditis elegans
Exon168830   104   V: 23793-23896 Caenorhabditis elegans
Exon168855   472   V: 24788-25259 Caenorhabditis elegans
Exon168880   165   V: 25965-26129 Caenorhabditis elegans
Exon168905   187   V: 26194-26380 Caenorhabditis elegans
Exon168937   180   V: 29336-29515 Caenorhabditis elegans
Exon168954   98   V: 30200-30297 Caenorhabditis elegans
Exon168992   142   V: 35015-35156 Caenorhabditis elegans
Exon169016   738   V: 36118-36855 Caenorhabditis elegans
Exon169040   296   V: 36918-37213 Caenorhabditis elegans
Exon169064   132   V: 38138-38269 Caenorhabditis elegans
Exon169085   36   V: 38991-39026 Caenorhabditis elegans
Exon169101   270   V: 40454-40723 Caenorhabditis elegans
Exon169125   116   V: 41729-41844 Caenorhabditis elegans
Exon169149   127   V: 42040-42166 Caenorhabditis elegans
Exon169173   104   V: 42214-42317 Caenorhabditis elegans
Exon169210   671   V: 43026-43696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4h.1 20818 43696 1

1 Sequence

Length
4693

1 Sequence Ontology Term

Identifier Name Description
transcript