WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0348.4e.1 Sequence Name  B0348.4e.1
Length (nt)  5016   Chromosome Location  V: 21007-43683
Chromosome . Primary Identifier  V Chromosome Location . Start  21007
Chromosome Location . End  43683 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4e B0348.4e 4503   V: 21007-21090

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4e.1 21007 43683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168758   84   V: 21007-21090 Caenorhabditis elegans
Exon168764   362   V: 22495-22856 Caenorhabditis elegans
Exon168789   136   V: 23159-23294 Caenorhabditis elegans
Exon168814   84   V: 23562-23645 Caenorhabditis elegans
Exon168827   104   V: 23793-23896 Caenorhabditis elegans
Exon168852   472   V: 24788-25259 Caenorhabditis elegans
Exon168877   165   V: 25965-26129 Caenorhabditis elegans
Exon168902   187   V: 26194-26380 Caenorhabditis elegans
Exon168926   318   V: 28382-28699 Caenorhabditis elegans
Exon168934   180   V: 29336-29515 Caenorhabditis elegans
Exon168951   98   V: 30200-30297 Caenorhabditis elegans
Exon168974   243   V: 31340-31582 Caenorhabditis elegans
Exon168989   142   V: 35015-35156 Caenorhabditis elegans
Exon169013   738   V: 36118-36855 Caenorhabditis elegans
Exon169037   296   V: 36918-37213 Caenorhabditis elegans
Exon169061   132   V: 38138-38269 Caenorhabditis elegans
Exon169098   270   V: 40454-40723 Caenorhabditis elegans
Exon169122   116   V: 41729-41844 Caenorhabditis elegans
Exon169146   127   V: 42040-42166 Caenorhabditis elegans
Exon169170   104   V: 42214-42317 Caenorhabditis elegans
Exon169201   658   V: 43026-43683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4e.1 21007 43683 1

1 Sequence

Length
5016

1 Sequence Ontology Term

Identifier Name Description
transcript