WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56E10.2a.2 Sequence Name  F56E10.2a.2
Length (nt)  3323   Chromosome Location  V: 64564-83832
Chromosome . Primary Identifier  V Chromosome Location . Start  64564
Chromosome Location . End  83832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56E10.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018976 daam-1 F56E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56E10.2a F56E10.2a 2964   V: 65604-65743

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56E10.2a.2 64564 83832 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169239   84   V: 64564-64647 Caenorhabditis elegans
Exon169240   353   V: 65391-65743 Caenorhabditis elegans
Exon169244   190   V: 66146-66335 Caenorhabditis elegans
Exon169249   840   V: 66454-67293 Caenorhabditis elegans
Exon169252   966   V: 68002-68967 Caenorhabditis elegans
Exon169255   147   V: 69959-70105 Caenorhabditis elegans
Exon169258   81   V: 70791-70871 Caenorhabditis elegans
Exon169262   87   V: 77316-77402 Caenorhabditis elegans
Exon169264   136   V: 79371-79506 Caenorhabditis elegans
Exon169266   131   V: 81150-81280 Caenorhabditis elegans
Exon169268   87   V: 83251-83337 Caenorhabditis elegans
Exon169270   103   V: 83411-83513 Caenorhabditis elegans
Exon169272   118   V: 83715-83832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56E10.2a.2 64564 83832 -1

1 Sequence

Length
3323

1 Sequence Ontology Term

Identifier Name Description
transcript