WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56E10.1a.1 Sequence Name  F56E10.1a.1
Length (nt)  6276   Chromosome Location  V: 104825-118205
Chromosome . Primary Identifier  V Chromosome Location . Start  104825
Chromosome Location . End  118205 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018975 picd-1 F56E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56E10.1a F56E10.1a 6159   V: 104830-104910

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56E10.1a.1 104825 118205 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169335   86   V: 104825-104910 Caenorhabditis elegans
Exon169337   992   V: 104969-105960 Caenorhabditis elegans
Exon169339   489   V: 106999-107487 Caenorhabditis elegans
Exon169341   414   V: 108025-108438 Caenorhabditis elegans
Exon169343   679   V: 109215-109893 Caenorhabditis elegans
Exon169345   630   V: 111086-111715 Caenorhabditis elegans
Exon169347   675   V: 112151-112825 Caenorhabditis elegans
Exon169349   389   V: 113191-113579 Caenorhabditis elegans
Exon169351   86   V: 113954-114039 Caenorhabditis elegans
Exon169353   438   V: 114663-115100 Caenorhabditis elegans
Exon169355   980   V: 115810-116789 Caenorhabditis elegans
Exon169358   294   V: 117364-117657 Caenorhabditis elegans
Exon169360   124   V: 118082-118205 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56E10.1a.1 104825 118205 1

1 Sequence

Length
6276

1 Sequence Ontology Term

Identifier Name Description
transcript