WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DC2.5a.1 Sequence Name  DC2.5a.1
Length (nt)  1259   Chromosome Location  V: 210145-212787
Chromosome . Primary Identifier  V Chromosome Location . Start  210145
Chromosome Location . End  212787 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DC2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017082 DC2.5 DC2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DC2.5a DC2.5a 1014   V: 210237-210773

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DC2.5a.1 210145 212787 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169542   629   V: 210145-210773 Caenorhabditis elegans
Exon169544   109   V: 210821-210929 Caenorhabditis elegans
Exon169546   260   V: 211424-211683 Caenorhabditis elegans
Exon169548   58   V: 211816-211873 Caenorhabditis elegans
Exon169550   203   V: 212585-212787 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DC2.5a.1 210145 212787 -1

1 Sequence

Length
1259

1 Sequence Ontology Term

Identifier Name Description
transcript