WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02C2.3a.1 Sequence Name  R02C2.3a.1
Length (nt)  2310   Chromosome Location  V: 246608-251752
Chromosome . Primary Identifier  V Chromosome Location . Start  246608
Chromosome Location . End  251752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02C2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006419 oac-39 R02C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02C2.3a R02C2.3a 2220   V: 246651-246854

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3a.1 246608 251752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169608   247   V: 246608-246854 Caenorhabditis elegans
Exon169612   214   V: 246909-247122 Caenorhabditis elegans
Exon169614   116   V: 247965-248080 Caenorhabditis elegans
Exon169616   112   V: 248131-248242 Caenorhabditis elegans
Exon169618   227   V: 248304-248530 Caenorhabditis elegans
Exon169620   368   V: 248913-249280 Caenorhabditis elegans
Exon169622   94   V: 249867-249960 Caenorhabditis elegans
Exon169624   190   V: 250005-250194 Caenorhabditis elegans
Exon169626   94   V: 250242-250335 Caenorhabditis elegans
Exon169628   128   V: 250389-250516 Caenorhabditis elegans
Exon169630   136   V: 250953-251088 Caenorhabditis elegans
Exon169632   199   V: 251136-251334 Caenorhabditis elegans
Exon169635   185   V: 251568-251752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3a.1 246608 251752 -1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript