WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02C2.3b.1 Sequence Name  R02C2.3b.1
Length (nt)  2136   Chromosome Location  V: 246651-251621
Chromosome . Primary Identifier  V Chromosome Location . Start  246651
Chromosome Location . End  251621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02C2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006419 oac-39 R02C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02C2.3b R02C2.3b 2136   V: 246651-246854

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3b.1 246651 251621 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169610   204   V: 246651-246854 Caenorhabditis elegans
Exon169613   214   V: 246909-247122 Caenorhabditis elegans
Exon169615   116   V: 247965-248080 Caenorhabditis elegans
Exon169617   112   V: 248131-248242 Caenorhabditis elegans
Exon169619   227   V: 248304-248530 Caenorhabditis elegans
Exon169621   368   V: 248913-249280 Caenorhabditis elegans
Exon169623   94   V: 249867-249960 Caenorhabditis elegans
Exon169625   190   V: 250005-250194 Caenorhabditis elegans
Exon169627   94   V: 250242-250335 Caenorhabditis elegans
Exon169629   128   V: 250389-250516 Caenorhabditis elegans
Exon169631   136   V: 250953-251088 Caenorhabditis elegans
Exon169633   199   V: 251136-251334 Caenorhabditis elegans
Exon169634   54   V: 251568-251621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02C2.3b.1 246651 251621 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript