WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y58G8A.1.1 Sequence Name  Y58G8A.1.1
Length (nt)  1648   Chromosome Location  V: 268307-271419
Chromosome . Primary Identifier  V Chromosome Location . Start  268307
Chromosome Location . End  271419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y58G8A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021981 lgc-26 Y58G8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y58G8A.1 Y58G8A.1 1461   V: 268342-268369

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y58G8A.1.1 268307 271419 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169662   63   V: 268307-268369 Caenorhabditis elegans
Exon169663   170   V: 268422-268591 Caenorhabditis elegans
Exon169664   152   V: 269104-269255 Caenorhabditis elegans
Exon169665   142   V: 269302-269443 Caenorhabditis elegans
Exon169666   145   V: 269497-269641 Caenorhabditis elegans
Exon169667   167   V: 270091-270257 Caenorhabditis elegans
Exon169668   154   V: 270317-270470 Caenorhabditis elegans
Exon169669   190   V: 270518-270707 Caenorhabditis elegans
Exon169670   465   V: 270955-271419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y58G8A.1.1 268307 271419 1

1 Sequence

Length
1648

1 Sequence Ontology Term

Identifier Name Description
transcript