WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y58G8A.4a Sequence Name  Y58G8A.4a
Length (nt)  1194   Chromosome Location  V: 277268-277369
Chromosome . Primary Identifier  V Chromosome Location . Start  277268
Chromosome Location . End  277369
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y58G8A.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33345 NPR-5, isoform a 44.5 397 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057734
WBRNAi00057735

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y58G8A.4a 277268 277369 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021983 npr-5 Y58G8A.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y58G8A.4a 277268 277369 -1
CDS:Y58G8A.4a 278175 278332 -1
CDS:Y58G8A.4a 279046 279274 -1
CDS:Y58G8A.4a 279371 279577 -1
CDS:Y58G8A.4a 280239 280395 -1
CDS:Y58G8A.4a 280580 280771 -1
CDS:Y58G8A.4a 281556 281704 -1

1 Sequence

Length
1194

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y58G8A.4a.1 Y58G8A.4a.1 1489   V: 276985-281716