WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H9.2a.1 Sequence Name  T22H9.2a.1
Length (nt)  3589   Chromosome Location  V: 349385-359658
Chromosome . Primary Identifier  V Chromosome Location . Start  349385
Chromosome Location . End  359658 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020706 atg-9 T22H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H9.2a T22H9.2a 2766   V: 349385-349417

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H9.2a.1 349385 359658 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169762   33   V: 349385-349417 Caenorhabditis elegans
Exon169763   131   V: 349473-349603 Caenorhabditis elegans
Exon169764   58   V: 349708-349765 Caenorhabditis elegans
Exon169765   207   V: 350338-350544 Caenorhabditis elegans
Exon169766   429   V: 351903-352331 Caenorhabditis elegans
Exon169767   192   V: 353163-353354 Caenorhabditis elegans
Exon169768   143   V: 353413-353555 Caenorhabditis elegans
Exon169769   863   V: 354725-355587 Caenorhabditis elegans
Exon169770   264   V: 356996-357259 Caenorhabditis elegans
Exon169771   79   V: 357613-357691 Caenorhabditis elegans
Exon169774   1190   V: 358469-359658 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H9.2a.1 349385 359658 1

1 Sequence

Length
3589

1 Sequence Ontology Term

Identifier Name Description
transcript