WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK6.11.1 Sequence Name  ZK6.11.1
Length (nt)  1244   Chromosome Location  V: 415870-417706
Chromosome . Primary Identifier  V Chromosome Location . Start  415870
Chromosome Location . End  417706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK6.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022645 irg-8 ZK6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK6.11 ZK6.11 1161   V: 415913-416025

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK6.11.1 415870 417706 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169901   156   V: 415870-416025 Caenorhabditis elegans
Exon169902   196   V: 416084-416279 Caenorhabditis elegans
Exon169903   134   V: 416641-416774 Caenorhabditis elegans
Exon169904   345   V: 416822-417166 Caenorhabditis elegans
Exon169905   155   V: 417244-417398 Caenorhabditis elegans
Exon169906   258   V: 417449-417706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK6.11.1 415870 417706 -1

1 Sequence

Length
1244

1 Sequence Ontology Term

Identifier Name Description
transcript