WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0554.6.1 Sequence Name  B0554.6.1
Length (nt)  1327   Chromosome Location  V: 422433-424177
Chromosome . Primary Identifier  V Chromosome Location . Start  422433
Chromosome Location . End  424177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0554.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015259 dod-20 B0554.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0554.6 B0554.6 1149   V: 422498-422706

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0554.6.1 422433 424177 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169941   274   V: 422433-422706 Caenorhabditis elegans
Exon169942   155   V: 422906-423060 Caenorhabditis elegans
Exon169943   339   V: 423105-423443 Caenorhabditis elegans
Exon169944   134   V: 423496-423629 Caenorhabditis elegans
Exon169945   199   V: 423701-423899 Caenorhabditis elegans
Exon169946   226   V: 423952-424177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0554.6.1 422433 424177 1

1 Sequence

Length
1327

1 Sequence Ontology Term

Identifier Name Description
transcript