WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0554.2.1 Sequence Name  B0554.2.1
Length (nt)  1890   Chromosome Location  V: 434198-436726
Chromosome . Primary Identifier  V Chromosome Location . Start  434198
Chromosome Location . End  436726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0554.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015255 B0554.2 B0554.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0554.2 B0554.2 1890   V: 434198-434327

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0554.2.1 434198 436726 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169963   130   V: 434198-434327 Caenorhabditis elegans
Exon169964   70   V: 434603-434672 Caenorhabditis elegans
Exon169965   354   V: 434722-435075 Caenorhabditis elegans
Exon169966   342   V: 435126-435467 Caenorhabditis elegans
Exon169967   366   V: 435524-435889 Caenorhabditis elegans
Exon169968   357   V: 436035-436391 Caenorhabditis elegans
Exon169969   271   V: 436456-436726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0554.2.1 434198 436726 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript