WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0554.7a Sequence Name  B0554.7a
Length (nt)  1422   Chromosome Location  V: 437576-437921
Chromosome . Primary Identifier  V Chromosome Location . Start  437576
Chromosome Location . End  437921
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0554.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50878 B0554.7, isoform a 52.4 473 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00039197
WBRNAi00039198
WBRNAi00009859
WBRNAi00009860
WBRNAi00023022
WBRNAi00023120
WBRNAi00023632
WBRNAi00023921

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0554.7a 437576 437921 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015260 B0554.7 B0554.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0554.7a 437576 437921 -1
CDS:B0554.7a 439318 439489 -1
CDS:B0554.7a 439544 439732 -1
CDS:B0554.7a 439775 439905 -1
CDS:B0554.7a 440348 440573 -1
CDS:B0554.7a 440619 440806 -1
CDS:B0554.7a 440854 441023 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0554.7a.1 B0554.7a.1 1914   V: 437084-441023