WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G6.8 Sequence Name  T01G6.8
Length (nt)  1323   Chromosome Location  V: 480883-480984
Chromosome . Primary Identifier  V Chromosome Location . Start  480883
Chromosome Location . End  480984
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G6.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18167 NHR-130 51.4 440 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052155
WBRNAi00017991
WBRNAi00035029

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G6.8 480883 480984 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003720 nhr-130 T01G6.8 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G6.8 480883 480984 -1
CDS:T01G6.8 481039 481309 -1
CDS:T01G6.8 481472 481662 -1
CDS:T01G6.8 481707 482051 -1
CDS:T01G6.8 482103 482197 -1
CDS:T01G6.8 482740 482873 -1
CDS:T01G6.8 483145 483329 -1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G6.8.1 T01G6.8.1 1402   V: 480814-483339