WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01G6.6b.1 Sequence Name  T01G6.6b.1
Length (nt)  1301   Chromosome Location  V: 484901-486897
Chromosome . Primary Identifier  V Chromosome Location . Start  484901
Chromosome Location . End  486897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G6.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020153 nhr-212 T01G6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01G6.6b T01G6.6b 1218   V: 484934-485115

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01G6.6b.1 484901 486897 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170115   215   V: 484901-485115 Caenorhabditis elegans
Exon170117   65   V: 485168-485232 Caenorhabditis elegans
Exon170119   410   V: 485696-486105 Caenorhabditis elegans
Exon170121   191   V: 486155-486345 Caenorhabditis elegans
Exon170123   268   V: 486429-486696 Caenorhabditis elegans
Exon170125   152   V: 486746-486897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01G6.6b.1 484901 486897 1

1 Sequence

Length
1301

1 Sequence Ontology Term

Identifier Name Description
transcript