WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G6.6a Sequence Name  T01G6.6a
Length (nt)  1212   Chromosome Location  V: 484934-485115
Chromosome . Primary Identifier  V Chromosome Location . Start  484934
Chromosome Location . End  485115
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G6.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35608 NHR-212, isoform a 47.7 403 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052153
WBRNAi00017989
WBRNAi00035028

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G6.6a 484934 485115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020153 nhr-212 T01G6.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G6.6a 484934 485115 1
CDS:T01G6.6a 485168 485226 1
CDS:T01G6.6a 485696 486105 1
CDS:T01G6.6a 486155 486345 1
CDS:T01G6.6a 486429 486696 1
CDS:T01G6.6a 486746 486847 1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G6.6a.1 T01G6.6a.1 1337   V: 484857-486895