WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31F4.16.1 Sequence Name  F31F4.16.1
Length (nt)  996   Chromosome Location  V: 651837-653040
Chromosome . Primary Identifier  V Chromosome Location . Start  651837
Chromosome Location . End  653040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31F4.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005593 srj-5 F31F4.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31F4.16 F31F4.16 996   V: 651837-652008

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31F4.16.1 651837 653040 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170533   172   V: 651837-652008 Caenorhabditis elegans
Exon170534   269   V: 652064-652332 Caenorhabditis elegans
Exon170535   205   V: 652377-652581 Caenorhabditis elegans
Exon170536   158   V: 652630-652787 Caenorhabditis elegans
Exon170537   192   V: 652849-653040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31F4.16.1 651837 653040 -1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript