WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31F4.3.1 Sequence Name  F31F4.3.1
Length (nt)  885   Chromosome Location  V: 679963-681465
Chromosome . Primary Identifier  V Chromosome Location . Start  679963
Chromosome Location . End  681465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005913 srx-22 F31F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31F4.3 F31F4.3 885   V: 679963-680001

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31F4.3.1 679963 681465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170683   39   V: 679963-680001 Caenorhabditis elegans
Exon170684   161   V: 680046-680206 Caenorhabditis elegans
Exon170685   594   V: 680693-681286 Caenorhabditis elegans
Exon170686   56   V: 681334-681389 Caenorhabditis elegans
Exon170687   35   V: 681431-681465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31F4.3.1 679963 681465 1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
transcript