WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49C4A.8a.1 Sequence Name  Y49C4A.8a.1
Length (nt)  1712   Chromosome Location  V: 696525-699156
Chromosome . Primary Identifier  V Chromosome Location . Start  696525
Chromosome Location . End  699156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49C4A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021709 ugt-29 Y49C4A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49C4A.8a Y49C4A.8a 1611   V: 696610-696799

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49C4A.8a.1 696525 699156 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170673   275   V: 696525-696799 Caenorhabditis elegans
Exon170675   456   V: 696850-697305 Caenorhabditis elegans
Exon170678   320   V: 697362-697681 Caenorhabditis elegans
Exon170682   312   V: 698026-698337 Caenorhabditis elegans
Exon170686   186   V: 698426-698611 Caenorhabditis elegans
Exon170691   163   V: 698994-699156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49C4A.8a.1 696525 699156 -1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript