WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49C4A.5 Sequence Name  Y49C4A.5
Length (nt)  1050   Chromosome Location  V: 690875-691081
Chromosome . Primary Identifier  V Chromosome Location . Start  690875
Chromosome Location . End  691081
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49C4A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26128 SRX-4 40.0 349 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056998
WBRNAi00020770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49C4A.5 690875 691081 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005895 srx-4 Y49C4A.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49C4A.5 690875 691081 -1
CDS:Y49C4A.5 691131 691305 -1
CDS:Y49C4A.5 691617 691696 -1
CDS:Y49C4A.5 691763 691892 -1
CDS:Y49C4A.5 691942 692070 -1
CDS:Y49C4A.5 692329 692441 -1
CDS:Y49C4A.5 692555 692770 -1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49C4A.5.1 Y49C4A.5.1 1050   V: 690875-692770