WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49C4A.6 Sequence Name  Y49C4A.6
Length (nt)  987   Chromosome Location  V: 693541-693697
Chromosome . Primary Identifier  V Chromosome Location . Start  693541
Chromosome Location . End  693697
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49C4A.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38248 SRJ-53 37.8 328 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056999
WBRNAi00020770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49C4A.6 693541 693697 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005632 srj-53 Y49C4A.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49C4A.6 693541 693697 -1
CDS:Y49C4A.6 693744 693913 -1
CDS:Y49C4A.6 693959 694060 -1
CDS:Y49C4A.6 694108 694476 -1
CDS:Y49C4A.6 694537 694725 -1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49C4A.6.1 Y49C4A.6.1 987   V: 693541-694725