WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05E4.9a Sequence Name  C05E4.9a
Length (nt)  2907   Chromosome Location  V: 724457-724782
Chromosome . Primary Identifier  V Chromosome Location . Start  724457
Chromosome Location . End  724782
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E4.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23521 ICL-1, isoform a 108.6 968 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00039791
WBRNAi00039792
WBRNAi00010238
WBRNAi00016312
WBRNAi00016315
WBRNAi00024302
WBRNAi00093541
WBRNAi00093543
WBRNAi00093545
WBRNAi00092257
WBRNAi00063159
WBRNAi00093904
WBRNAi00093971
WBRNAi00093935
WBRNAi00092258
WBRNAi00092303

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05E4.9a 724457 724782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05E4.9a 724457 724782 -1
CDS:C05E4.9a 724835 726083 -1
CDS:C05E4.9a 726152 726979 -1
CDS:C05E4.9a 727385 727858 -1
CDS:C05E4.9a 727928 727957 -1

1 Sequence

Length
2907

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05E4.9a.1 C05E4.9a.1 3073   V: 724338-728004