WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05E4.14a.1 Sequence Name  C05E4.14a.1
Length (nt)  804   Chromosome Location  V: 728312-734305
Chromosome . Primary Identifier  V Chromosome Location . Start  728312
Chromosome Location . End  734305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E4.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005228 srh-2 C05E4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05E4.14a C05E4.14a 546   V: 731646-731715

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05E4.14a.1 728312 734305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170744   65   V: 728312-728376 Caenorhabditis elegans
Exon170747   93   V: 731437-731529 Caenorhabditis elegans
Exon170748   144   V: 731572-731715 Caenorhabditis elegans
Exon170756   26   V: 731841-731866 Caenorhabditis elegans
Exon170768   131   V: 732039-732169 Caenorhabditis elegans
Exon170796   97   V: 733864-733960 Caenorhabditis elegans
Exon170799   97   V: 734011-734107 Caenorhabditis elegans
Exon170822   151   V: 734155-734305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05E4.14a.1 728312 734305 1

1 Sequence

Length
804

1 Sequence Ontology Term

Identifier Name Description
transcript