WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05E4.10.1 Sequence Name  C05E4.10.1
Length (nt)  1035   Chromosome Location  V: 734420-736271
Chromosome . Primary Identifier  V Chromosome Location . Start  734420
Chromosome Location . End  736271 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005613 srj-25 C05E4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05E4.10 C05E4.10 1035   V: 734420-734621

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05E4.10.1 734420 736271 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170825   202   V: 734420-734621 Caenorhabditis elegans
Exon170826   272   V: 734670-734941 Caenorhabditis elegans
Exon170827   117   V: 735097-735213 Caenorhabditis elegans
Exon170828   88   V: 735268-735355 Caenorhabditis elegans
Exon170829   107   V: 735401-735507 Caenorhabditis elegans
Exon170830   60   V: 735553-735612 Caenorhabditis elegans
Exon170831   189   V: 736083-736271 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05E4.10.1 734420 736271 -1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript