WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05E4.2a Sequence Name  C05E4.2a
Length (nt)  1056   Chromosome Location  V: 756469-756687
Chromosome . Primary Identifier  V Chromosome Location . Start  756469
Chromosome Location . End  756687
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25757 STR-20, isoform a 40.5 351 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00039782
WBRNAi00010231

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05E4.2a 756469 756687 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006087 str-20 C05E4.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05E4.2a 756469 756687 1
CDS:C05E4.2a 756733 757034 1
CDS:C05E4.2a 757197 757283 1
CDS:C05E4.2a 757336 757685 1
CDS:C05E4.2a 757732 757829 1

1 Sequence

Length
1056

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05E4.2a.1 C05E4.2a.1 1119   V: 756469-757892