WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09E12.1.1 Sequence Name  R09E12.1.1
Length (nt)  891   Chromosome Location  V: 778639-780223
Chromosome . Primary Identifier  V Chromosome Location . Start  778639
Chromosome Location . End  780223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09E12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019981 srbc-59 R09E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09E12.1 R09E12.1 891   V: 778639-778813

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09E12.1.1 778639 780223 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170960   175   V: 778639-778813 Caenorhabditis elegans
Exon170961   356   V: 778865-779220 Caenorhabditis elegans
Exon170962   102   V: 779803-779904 Caenorhabditis elegans
Exon170963   258   V: 779966-780223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09E12.1.1 778639 780223 1

1 Sequence

Length
891

1 Sequence Ontology Term

Identifier Name Description
transcript