WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13D11.6a.1 Sequence Name  R13D11.6a.1
Length (nt)  999   Chromosome Location  V: 782732-784763
Chromosome . Primary Identifier  V Chromosome Location . Start  782732
Chromosome Location . End  784763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13D11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020060 srab-16 R13D11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13D11.6a R13D11.6a 975   V: 782756-782964

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13D11.6a.1 782732 784763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170968   233   V: 782732-782964 Caenorhabditis elegans
Exon170969   78   V: 783076-783153 Caenorhabditis elegans
Exon170970   229   V: 783205-783433 Caenorhabditis elegans
Exon170971   108   V: 783491-783598 Caenorhabditis elegans
Exon170972   196   V: 783648-783843 Caenorhabditis elegans
Exon170973   65   V: 784548-784612 Caenorhabditis elegans
Exon170975   90   V: 784674-784763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13D11.6a.1 782732 784763 1

1 Sequence

Length
999

1 Sequence Ontology Term

Identifier Name Description
transcript