WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13D11.8a.1 Sequence Name  R13D11.8a.1
Length (nt)  1299   Chromosome Location  V: 802546-804741
Chromosome . Primary Identifier  V Chromosome Location . Start  802546
Chromosome Location . End  804741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13D11.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020062 nhr-270 R13D11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13D11.8a R13D11.8a 1200   V: 802645-802901

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13D11.8a.1 802546 804741 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170985   356   V: 802546-802901 Caenorhabditis elegans
Exon170987   113   V: 802967-803079 Caenorhabditis elegans
Exon170989   481   V: 803371-803851 Caenorhabditis elegans
Exon170990   349   V: 804393-804741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13D11.8a.1 802546 804741 -1

1 Sequence

Length
1299

1 Sequence Ontology Term

Identifier Name Description
transcript