WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C6.8a.1 Sequence Name  K09C6.8a.1
Length (nt)  1702   Chromosome Location  V: 840210-843218
Chromosome . Primary Identifier  V Chromosome Location . Start  840210
Chromosome Location . End  843218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C6.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019562 K09C6.8 K09C6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C6.8a K09C6.8a 1656   V: 840256-840477

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C6.8a.1 840210 843218 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171058   268   V: 840210-840477 Caenorhabditis elegans
Exon171060   105   V: 840523-840627 Caenorhabditis elegans
Exon171062   321   V: 841011-841331 Caenorhabditis elegans
Exon171065   105   V: 841380-841484 Caenorhabditis elegans
Exon171068   321   V: 841773-842093 Caenorhabditis elegans
Exon171069   105   V: 842137-842241 Caenorhabditis elegans
Exon171071   108   V: 842311-842418 Caenorhabditis elegans
Exon171073   133   V: 842471-842603 Caenorhabditis elegans
Exon171076   236   V: 842983-843218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C6.8a.1 840210 843218 -1

1 Sequence

Length
1702

1 Sequence Ontology Term

Identifier Name Description
transcript