WormMine: Gene WBGene00255731

• WormBase Gene ID: WBGene00255731
• Gene Name: srlf-21
• Sequence Name: T02B11.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by nas-38 and ogt-1 based on RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain; SXP/RAL-2 family protein Ani s 5-like, cation-binding domain; and SXP/RAL-2-related.
• Biotype: SO:0001217
• Genetic Position: :±
• Length (nt): 810

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00255731

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:T02B11.11.1	T02B11.11.1	720	V: 889714-890523

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:T02B11.11	T02B11.11	720	V: 889714-889821

0 RNAi Result

37 Allele

• WBVar01584372
• WBVar01584373
• WBVar01584374
• gk963591
• gk963553
• gk964259
• gk963850
• gk963027
• gk963889
• gk962552
• gk962551
• WBVar02120514
• WBVar01609858
• WBVar01609859
• WBVar01609857
• WBVar00202076
• WBVar01774428
• WBVar01774427
• WBVar01774426
• WBVar01737582
• WBVar01520774
• WBVar01520773
• WBVar01520776
• WBVar01520775
• WBVar01520770
• WBVar01520772
• WBVar01520771
• gk567013
• gk631800
• gk749937

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00255731
• Start: 889714
• End: 890523
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_889317..889713
• Length (nt): 397
• Chromosome Location: V: 889317-889713
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts that showed significantly increased expression in nas-38(ok3407) comparing to in N2.	A feature was classified upregulated if its FDR-corrected p-value was <= 0.05 and fold change was >= 2. Analogously, a gene was classified downregulated if its FDR-corrected p-value was <= 0.05 and fold change was <= -2.	WBPaper00060703:nas-38(ok3407)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00255731
• Start: 889714
• End: 890523
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 810

1 Sequence Ontology Term