WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4C.1a.1 Sequence Name  Y50D4C.1a.1
Length (nt)  2917   Chromosome Location  V: 982706-996914
Chromosome . Primary Identifier  V Chromosome Location . Start  982706
Chromosome Location . End  996914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4C.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006770 unc-34 Y50D4C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4C.1a Y50D4C.1a 1407   V: 982706-982710

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4C.1a.1 982706 996914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171360   5   V: 982706-982710 Caenorhabditis elegans
Exon171362   380   V: 985096-985475 Caenorhabditis elegans
Exon171366   97   V: 987096-987192 Caenorhabditis elegans
Exon171371   422   V: 990236-990657 Caenorhabditis elegans
Exon171377   244   V: 992925-993168 Caenorhabditis elegans
Exon171382   126   V: 994205-994330 Caenorhabditis elegans
Exon171391   1643   V: 995272-996914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4C.1a.1 982706 996914 1

1 Sequence

Length
2917

1 Sequence Ontology Term

Identifier Name Description
transcript