WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R09A1.1b Sequence Name  R09A1.1b
Length (nt)  2145   Chromosome Location  V: 1012215-1013038
Chromosome . Primary Identifier  V Chromosome Location . Start  1012215
Chromosome Location . End  1013038
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A1.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50770 ERGO-1, isoform b 80.9 714 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00051577

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R09A1.1b 1012215 1013038 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019971 ergo-1 R09A1.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R09A1.1b 1012215 1013038 1
CDS:R09A1.1b 1014099 1014373 1
CDS:R09A1.1b 1015079 1015158 1
CDS:R09A1.1b 1016368 1017230 1
CDS:R09A1.1b 1017971 1018073 1

1 Sequence

Length
2145

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R09A1.1b.1 R09A1.1b.1 2145   V: 1012215-1018073