WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4B.4d.1 Sequence Name  Y50D4B.4d.1
Length (nt)  1278   Chromosome Location  V: 1092679-1098883
Chromosome . Primary Identifier  V Chromosome Location . Start  1092679
Chromosome Location . End  1098883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4B.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021743 Y50D4B.4 Y50D4B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4B.4d Y50D4B.4d 1278   V: 1092679-1092731

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.4d.1 1092679 1098883 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171554   53   V: 1092679-1092731 Caenorhabditis elegans
Exon171560   134   V: 1092816-1092949 Caenorhabditis elegans
Exon171566   236   V: 1092996-1093231 Caenorhabditis elegans
Exon171572   126   V: 1093273-1093398 Caenorhabditis elegans
Exon171577   72   V: 1093444-1093515 Caenorhabditis elegans
Exon171593   97   V: 1096424-1096520 Caenorhabditis elegans
Exon171598   254   V: 1097812-1098065 Caenorhabditis elegans
Exon171604   126   V: 1098111-1098236 Caenorhabditis elegans
Exon171610   69   V: 1098399-1098467 Caenorhabditis elegans
Exon171616   100   V: 1098514-1098613 Caenorhabditis elegans
Exon171621   11   V: 1098873-1098883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.4d.1 1092679 1098883 1

1 Sequence

Length
1278

1 Sequence Ontology Term

Identifier Name Description
transcript