WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4B.4f.1 Sequence Name  Y50D4B.4f.1
Length (nt)  1278   Chromosome Location  V: 1092679-1098883
Chromosome . Primary Identifier  V Chromosome Location . Start  1092679
Chromosome Location . End  1098883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4B.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021743 Y50D4B.4 Y50D4B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4B.4f Y50D4B.4f 1278   V: 1092679-1092731

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.4f.1 1092679 1098883 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171556   53   V: 1092679-1092731 Caenorhabditis elegans
Exon171562   134   V: 1092816-1092949 Caenorhabditis elegans
Exon171568   236   V: 1092996-1093231 Caenorhabditis elegans
Exon171588   126   V: 1096138-1096263 Caenorhabditis elegans
Exon171591   72   V: 1096309-1096380 Caenorhabditis elegans
Exon171595   97   V: 1096424-1096520 Caenorhabditis elegans
Exon171600   254   V: 1097812-1098065 Caenorhabditis elegans
Exon171606   126   V: 1098111-1098236 Caenorhabditis elegans
Exon171612   69   V: 1098399-1098467 Caenorhabditis elegans
Exon171618   100   V: 1098514-1098613 Caenorhabditis elegans
Exon171623   11   V: 1098873-1098883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4B.4f.1 1092679 1098883 1

1 Sequence

Length
1278

1 Sequence Ontology Term

Identifier Name Description
transcript