WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4B.4a.1 Sequence Name  Y50D4B.4a.1
Length (nt)  2463   Chromosome Location  V: 1092659-1098950
Chromosome . Primary Identifier  V Chromosome Location . Start  1092659
Chromosome Location . End  1098950 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4B.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021743 Y50D4B.4 Y50D4B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4B.4a Y50D4B.4a 2376   V: 1092679-1092731

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4B.4a.1 1092659 1098950 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171606   73   V: 1092659-1092731 Caenorhabditis elegans
Exon171612   134   V: 1092816-1092949 Caenorhabditis elegans
Exon171618   236   V: 1092996-1093231 Caenorhabditis elegans
Exon171624   126   V: 1093273-1093398 Caenorhabditis elegans
Exon171629   72   V: 1093444-1093515 Caenorhabditis elegans
Exon171633   97   V: 1093560-1093656 Caenorhabditis elegans
Exon171636   254   V: 1094312-1094565 Caenorhabditis elegans
Exon171638   141   V: 1094616-1094756 Caenorhabditis elegans
Exon171639   72   V: 1094891-1094962 Caenorhabditis elegans
Exon171640   100   V: 1095009-1095108 Caenorhabditis elegans
Exon171641   236   V: 1095861-1096096 Caenorhabditis elegans
Exon171642   126   V: 1096138-1096263 Caenorhabditis elegans
Exon171644   72   V: 1096309-1096380 Caenorhabditis elegans
Exon171647   97   V: 1096424-1096520 Caenorhabditis elegans
Exon171651   254   V: 1097812-1098065 Caenorhabditis elegans
Exon171656   126   V: 1098111-1098236 Caenorhabditis elegans
Exon171662   69   V: 1098399-1098467 Caenorhabditis elegans
Exon171668   100   V: 1098514-1098613 Caenorhabditis elegans
Exon171679   78   V: 1098873-1098950 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y50D4B.4a.1 1092659 1098950 1

1 Sequence

Length
2463

1 Sequence Ontology Term

Identifier Name Description
transcript