WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H3.1a.1 Sequence Name  T21H3.1a.1
Length (nt)  958   Chromosome Location  V: 1176724-1178864
Chromosome . Primary Identifier  V Chromosome Location . Start  1176724
Chromosome Location . End  1178864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020662 T21H3.1 T21H3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H3.1a T21H3.1a 918   V: 1176725-1177096

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H3.1a.1 1176724 1178864 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171777   373   V: 1176724-1177096 Caenorhabditis elegans
Exon171778   126   V: 1177145-1177270 Caenorhabditis elegans
Exon171779   348   V: 1178356-1178703 Caenorhabditis elegans
Exon171782   111   V: 1178754-1178864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H3.1a.1 1176724 1178864 1

1 Sequence

Length
958

1 Sequence Ontology Term

Identifier Name Description
transcript