WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50D4A.1a.1 Sequence Name  Y50D4A.1a.1
Length (nt)  2547   Chromosome Location  V: 1207889-1219863
Chromosome . Primary Identifier  V Chromosome Location . Start  1207889
Chromosome Location . End  1219863 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021735 Y50D4A.1 Y50D4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50D4A.1a Y50D4A.1a 2466   V: 1207896-1207973

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4A.1a.1 1207889 1219863 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171783   85   V: 1207889-1207973 Caenorhabditis elegans
Exon171784   91   V: 1208033-1208123 Caenorhabditis elegans
Exon171785   186   V: 1209045-1209230 Caenorhabditis elegans
Exon171787   306   V: 1210317-1210622 Caenorhabditis elegans
Exon171790   373   V: 1212196-1212568 Caenorhabditis elegans
Exon171793   90   V: 1213987-1214076 Caenorhabditis elegans
Exon171797   119   V: 1214828-1214946 Caenorhabditis elegans
Exon171801   107   V: 1215004-1215110 Caenorhabditis elegans
Exon171808   1190   V: 1218674-1219863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50D4A.1a.1 1207889 1219863 1

1 Sequence

Length
2547

1 Sequence Ontology Term

Identifier Name Description
transcript